Research Topic: pathogen genomics

Intraspecies sequence-graph analysis of the Phytophthora theobromicola genome reveals a dynamic structure and variable effector repertoires

Researchers sequenced the genome of Phytophthora theobromicola, a newly discovered fungal pathogen that causes serious cacao plant disease. They found the pathogen’s genome is highly variable among different isolates and contains many genes that help it attack cacao plants. By studying which of these harmful genes are active during infection, they identified specific virulence factors unique to this cacao pathogen that could be important targets for future disease control strategies.

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Discovery of novel targets for important human and plant fungal pathogens via an automated computational pipeline HitList

Researchers created a computer program called HitList that searches fungal DNA to find new targets for antifungal medications. The program identified 16 promising protein targets that could be attacked by new antifungal drugs, including 8 completely new targets never before considered. This discovery could help develop new antifungal treatments to fight drug-resistant fungal infections in both humans and crops.

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