Research Keyword: whole genome assembly

Improved Extraction Methods to Isolate High Molecular Weight DNA From Magnaporthaceae and Other Grass Root Fungi for Long-Read Whole Genome Sequencing

Scientists have developed improved methods to extract high-quality DNA from pathogenic fungi, which is essential for sequencing and understanding how these fungi cause plant diseases. Two different extraction techniques were refined and tested on Magnaporthaceae fungi: one that works with small amounts of fungal material, and another that produces longer DNA strands when more material is available. The key to success is harvesting the fungi before they accumulate dark pigments that interfere with DNA extraction. These protocols will help researchers create better genome maps of disease-causing fungi, leading to improved strategies for crop protection.

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Whole Genome Sequence of the Commercially Relevant Mushroom Strain Agaricus bisporus var. bisporus ARP23

Researchers sequenced the complete genome of a wild button mushroom strain (ARP23) that has been successfully bred with commercial mushrooms to create the ‘Heirloom’ variety. This strain is larger and contains more genes than other known button mushroom strains, making it valuable for breeding disease-resistant varieties. The genome sequence reveals that all button mushroom strains share core genes for breaking down plant material in compost, but have diverse collections of optional genes. This genetic resource provides a foundation for developing mushrooms more resistant to diseases and viruses.

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