transcriptomics – Page 3

The Nearly Complete Genome of Grifola frondosa and Light-Induced Genes Screened Based on Transcriptomics Promote the Production of Triterpenoid Compounds

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Researchers sequenced the complete genetic code of maitake mushroom (Grifola frondosa) and discovered how light exposure influences the production of beneficial compounds called triterpenoids. The high-quality genome assembly revealed 12,526 genes and showed that light triggers specific genes involved in making these medicinal compounds. This breakthrough provides a scientific foundation for growing maitake mushrooms with optimized levels of health-promoting substances.

Advances in the Degradation of Polycyclic Aromatic Hydrocarbons by Yeasts: A Review

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This review explores how yeasts, tiny single-celled fungi, can clean up environments contaminated with polycyclic aromatic hydrocarbons (PAHs) – harmful chemicals produced by car emissions, factories, and burning. These yeasts use special enzymes to break down these toxic compounds into less harmful substances, making them a promising natural solution for environmental cleanup. Scientists are also improving these yeasts through genetic engineering to make them even more effective at removing pollution.

Bioremediation potential of low-brominated polybrominated diphenyl by the phyllospheric Wickerhamomyces anomalus

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Researchers discovered that a common yeast living on tree leaves can help remove harmful brominated chemicals (PBDEs) from the environment. By studying the genes this yeast uses to survive these toxic chemicals, scientists identified a key transport protein that could help plants better tolerate and accumulate these pollutants. This finding suggests that this yeast could be used as a biological tool to clean up areas contaminated with these persistent toxic chemicals.

Comparative Transcriptome Profiles of the Response of Mycelia of the Genus Morchella to Temperature Stress: An Examination of Potential Resistance Mechanisms

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Scientists studied how morel mushrooms respond to different temperatures to understand why cultivation can be unpredictable. By analyzing gene activity in mushroom mycelia (the underground filaments) at temperatures from 5°C to 30°C, they found that 15-20°C was ideal for growth. At higher temperatures, the mushrooms showed signs of stress similar to heat damage in other organisms, turning brownish and activating protective genes. This research helps mushroom farmers optimize growing conditions for better yields.

Enhancement of polysaccharides production using microparticle enhanced technology by Paraisaria dubia

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Researchers developed a new method to produce medicinal polysaccharides from a Cordyceps fungus using tiny talc particles to improve fermentation. By adding the right amount and size of talc particles, they were able to produce significantly more polysaccharides with beneficial health properties. The method works well in large-scale bioreactors and could be used to produce these valuable medicinal compounds more efficiently.

Control effects and mechanisms of metabolites from Streptomyces ahygroscopicus var. gongzhulingensis strain 769 on sclerotinia rot in sunflowers

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Scientists discovered that a beneficial soil bacterium called Streptomyces can effectively control sunflower rot disease caused by a harmful fungus. When applied to soil or roots, this bacterium reduced disease severity by over 50% and improved plant root health and seed quality. The treatment works by both directly killing the pathogenic fungus and strengthening the plant’s natural defense systems.

Enhancing Phenanthrene Degradation by Burkholderia sp. FM-2 with Rhamnolipid: Mechanistic Insights from Cell Surface Properties and Transcriptomic Analysis

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Scientists studied how a natural soap-like substance called rhamnolipid can help bacteria degrade phenanthrene, a dangerous pollution compound found in oil-contaminated soil. They found that the right amount of this substance makes the bacteria better at breaking down the pollutant by changing the bacteria’s surface properties and activating specific genes. The research shows promise for developing better methods to clean up contaminated environments.

A review and case study of Rhododendron moulmainense highlights the feasibility and adaptation of evergreen Rhododendron plants to current environmental challenges

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This study examines Rhododendron moulmainense, a beautiful alpine flowering plant being adapted for urban gardens. Researchers discovered that special soil fungi living in the plant’s roots help it survive stress like drought and heat. The study details multiple ways to grow new plants through cuttings, tissue culture, and seeds, with success rates over 90%. Understanding this plant’s adaptation mechanisms provides strategies for introducing more alpine rhododendrons to lower-altitude cities while improving their resilience to climate challenges.

Antifungal mechanism of ketone volatile organic compounds against Pseudogymnoascus destructans

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Researchers discovered that two ketone compounds, 2-undecanone and 2-nonanone, effectively kill Pseudogymnoascus destructans, the fungus that causes white-nose syndrome in bats. Using advanced genetic analysis, they found these ketones work by damaging the fungus’s cell structure, disrupting its energy production, and causing DNA damage. This research provides a foundation for developing new fumigant treatments to protect bat populations from this devastating fungal disease.

Functions of the Three Common Fungal Extracellular Membrane (CFEM) Domain-Containing Genes of Arthrobotrys flagrans in the Process of Nematode Trapping

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Researchers studied how a fungus called Arthrobotrys flagrans catches and kills parasitic worms. They found that three genes containing a special protein domain called CFEM control how the fungus produces sticky traps and deadly proteins. By studying mutant fungi with these genes deleted or overexpressed, they discovered that these genes work together and can compensate for each other, helping explain how this fungus could be used as a natural pest control for harmful nematodes.

Research Keyword: transcriptomics