phylogenetic analysis – Page 22

Morphological and Molecular Characterization of Apple Scab (Venturia inaequalis) in Kazakhstan and Kyrgyzstan

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Apple scab is a serious fungal disease that damages apple trees and fruit, causing significant crop losses worldwide. This study examined apple scab fungus in Kazakhstan and Kyrgyzstan, surveying 30 different apple populations and testing 302 samples. Using DNA testing and microscopy, researchers confirmed the fungus is present in about 16% of the apple populations studied, with different populations showing distinct genetic patterns based on their geographic location and whether the apples were wild or cultivated.

Novel and advanced MNP molecular markers accurately identify the genetic similarity of Hypsizygus marmoreus strains: a comparative evaluation with ISSR and antagonistic methods

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Scientists developed a new DNA-based method to accurately identify different strains of king oyster mushrooms (Hypsizygus marmoreus). Using advanced genetic analysis on 32 mushroom varieties, they created a database of 369 genetic markers that can distinguish between strains with high accuracy. This new method is faster and more reliable than traditional testing methods, helping mushroom farmers and breeders maintain quality and prevent confusion between similar-looking varieties.

Didymellaceae species associated with tea plant (Camellia sinensis) in China

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Researchers identified 25 different fungal species from the Didymellaceae family that can infect tea plant leaves in China, including six previously unknown species. By testing how harmful these fungi are to tea plants, they found that some species cause severe damage while others are harmless. These findings help tea farmers understand and manage leaf blight disease that threatens tea crop production.

From seagrass roots to saline soils: discovery of two new genera in Lulworthiales (Sordariomycetes) from osmotically stressed habitats

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Scientists discovered two previously unknown types of fungi – one living in the roots of seagrass in Mauritius and another found in salty soils in the Czech Republic. These fungi belong to a special group that thrives in salty environments. By studying their DNA and physical characteristics, researchers confirmed these are entirely new species and determined where they fit in the fungal family tree. The findings suggest that these salt-loving fungi are more widespread than previously thought and can live in both ocean and inland salty habitats.

Whole-genome sequencing of global forest pathogen Diplodia sapinea causing pine shoot blight

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Scientists have sequenced the complete genome of Diplodia sapinea, a fungus that causes serious disease in pine trees worldwide. This fungus normally lives harmlessly inside healthy pine trees but becomes dangerous during stressful conditions like droughts or storms. The new genome information will help scientists understand how this pathogen works and develop better ways to prevent and control the disease in forests.

Isolation and molecular identification of pathogens causing sea turtle egg fusariosis in key nesting beaches in Costa Rica

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Researchers in Costa Rica discovered that a dangerous fungal disease affecting sea turtle eggs is more widespread than previously known. The disease, called sea turtle egg fusariosis, is caused by two types of fungi that can kill developing turtle embryos. Scientists used advanced genetic testing to identify these fungi at major turtle nesting beaches on both coasts of Costa Rica, finding one fungus present at all locations while another was found only on the Caribbean coast. While the disease is not severely harming Costa Rican sea turtles yet, environmental changes could make it worse in the future.

Genome Sequencing of Hericium coralloides by a Combination of PacBio RS II and Next-Generation Sequencing Platforms

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Scientists successfully sequenced the complete genome of Hericium coralloides, a medicinal mushroom used in traditional Chinese medicine for treating heart disease, cancer, and stomach problems. Using advanced sequencing technology combining long-read and short-read methods, they assembled the 55 million base pair genome containing over 11,700 genes. This genetic blueprint reveals the mushroom contains genes for producing beneficial enzymes and compounds with therapeutic potential. This milestone opens the door for future research to develop new medicines based on this mushroom’s natural bioactive properties.

Phylogenetic diversity of Colletotrichum species (Sordariomycetes, Glomerellales, Glomerellaceae) associated with plant diseases in Thailand

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Researchers in Thailand studied a common fungal plant pathogen called Colletotrichum that causes diseases like anthracnose and leaf spots on various plants. They identified eight different species of this fungus and discovered two previously unknown species. The study helps farmers and plant scientists better understand and identify these disease-causing fungi to protect their crops.

Sporothrix davidellisii: A new pathogenic species belonging to the Sporothrix pallida complex

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Scientists have identified a new fungal species called Sporothrix davidellisii that causes an infection in cats. This fungus was found in an infected cat in Australia and is related to other fungi that cause sporotrichosis, a skin disease in humans and animals. The discovery shows that cats can help scientists identify new fungal pathogens in their environments, making them important sentinels for tracking emerging diseases.

Basidiobolomycosis caused by a rare species – Basidiobolus meristosporus

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A five-year-old girl developed large swollen lumps on her buttock and thigh that were initially thought to be tuberculosis or cancer. Doctors took a tissue sample and found it was caused by a rare fungus called Basidiobolus meristosporus. Using advanced DNA sequencing techniques, they identified the exact fungus species and treated her successfully with an antifungal medication called itraconazole, leading to complete healing within six weeks.

Research Keyword: phylogenetic analysis