metagenomics – Page 3

Temperature and Geographic Location Impact the Distribution and Diversity of Photoautotrophic Gene Variants in Alkaline Yellowstone Hot Springs

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Scientists studied bacteria that use sunlight to survive in extremely hot alkaline springs in Yellowstone National Park. They found that the location of the spring matters more than temperature in determining which types of bacteria live there, especially for the heat-loving bacteria called Chloroflexi. The study revealed these bacteria have various genes for capturing energy from light and fixing nitrogen and carbon, making them important players in these extreme environments.

Editorial: Unraveling pathogen-plant-microbiome interactions in horticultural crops through omics approaches

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This editorial presents a collection of research on how diseases affect valuable crops like tomatoes, tea, and potatoes. Scientists used advanced genetic and molecular techniques to understand how pathogens infect plants and how the beneficial microbes around plant roots can help fight disease. The studies suggest that managing crop diseases sustainably requires understanding the complex interactions between pathogens, plants, and their microbial communities.

What’s in a name? Fit-for-purpose bacterial nomenclature: meeting report

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Scientists are discovering and renaming bacteria so rapidly that doctors and other professionals sometimes don’t recognize the new names, which can cause confusion in patient care and food safety. This meeting brought together experts to discuss the problem and create better systems for managing these changes. The key finding is that when bacteria get new scientific names, there needs to be better communication with the practical users like clinicians so they stay informed and can provide proper treatment.

The putatively high‐altitude adaptation of macaque monkeys: Evidence from the fecal metabolome and gut microbiome

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This study examined how macaque monkeys living on the high Tibetan Plateau adapt to harsh conditions. Researchers found that high-altitude macaques have darker feces containing more stercobilin, a pigment from red blood cell breakdown. Their gut bacteria are specially adapted to process this increased bilirubin from the extra red blood cells produced at high altitude. Interestingly, high-altitude macaques also eat medicinal mushrooms like Ganoderma lucidum, which may help them cope with the stress and low oxygen levels.

Cross-cohort microbiome-wide study reveals consistent alterations in the gut bacteriome, but not the gut mycobiome, in patients with hypertension

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Researchers analyzed gut bacteria and fungi in hypertensive patients compared to healthy people across two regions in China. They found that hypertensive patients have significant changes in their gut bacteria, particularly an overgrowth of harmful species like Clostridium and a decrease in beneficial bacteria. Interestingly, fungi in the gut showed minimal differences. These bacterial changes could potentially be used as early warning signs for hypertension and might become targets for new treatments.

Human Gut Microbiome: A Connecting Organ Between Nutrition, Metabolism, and Health

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Your gut bacteria function like an extra organ, helping digest food and producing important compounds that affect your whole body. The type of bacteria in your gut depends on diet, delivery method at birth, and antibiotics you’ve taken. Eating more fiber and taking certain probiotics can improve your bacterial balance and help prevent diseases like diabetes, obesity, and heart problems. This suggests that managing your gut microbiome through diet might be just as important as taking traditional medicines for staying healthy.

Effects of a biotechnologically produced Pleurotus sapidus mycelium on gut microbiome, liver transcriptome and plasma metabolome of broilers

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Researchers tested whether mushroom mycelium grown using agricultural waste could be safely added to chicken feed. The mycelium, rich in beneficial compounds like β-glucans, was added to broiler diets at varying levels for 35 days. Results showed that chickens fed diets containing up to 5% mushroom mycelium performed just as well as control chickens, with no negative effects on health, digestion, or metabolism, suggesting this sustainable feed ingredient could help reduce competition between animal feed and human food.

Editorial: Innovation in tackling the global challenge of eradicating antibiotic-resistant microorganisms

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Antibiotic resistance is a serious global health problem causing millions of deaths annually. Scientists are developing new approaches to fight resistant bacteria, including using bacteriophages (viruses that attack bacteria), improving detection methods, and testing plant-based compounds. This editorial discusses 15 research papers showing various innovative strategies, emphasizing that we need multiple tools working together rather than relying on any single solution to solve this complex problem.

The Structural and Functional Diversities of Bacteria Inhabiting Plant Woody Tissues and Their Interactions with Fungi

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Bacteria living in tree wood work together with fungi to break down wood and nutrients, which is important for forest health. Some bacteria can protect trees from harmful fungi by fighting them off, making them useful for controlling plant diseases. Understanding how bacteria and fungi interact in wood can help us grow healthier plants, manage tree diseases better, and improve wood decomposition processes.

Metagenomics and In Vitro Growth-Promoting Experiments Revealed the Potential Roles of Mycorrhizal Fungus Humicolopsis cephalosporioides and Helper Bacteria in Cheilotheca humilis Growth

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Scientists studied a rare white plant called Cheilotheca humilis that cannot make its own food through photosynthesis and instead relies on fungi to survive. Using advanced DNA sequencing and laboratory experiments, they discovered that a special fungus called Humicolopsis cephalosporioides and several types of helpful bacteria work together to provide the plant with essential carbon and nutrients. This research reveals how these invisible microbial partners make it possible for this unusual plant to grow and thrive.

Research Keyword: metagenomics