biosynthetic gene clusters – Page 3

mGem: How many fungal secondary metabolites are produced by filamentous fungi? Conservatively, at least 1.4 million

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Scientists have discovered about 30,000 fungal compounds with useful properties, from life-saving antibiotics like penicillin to cholesterol-lowering drugs. However, new research suggests that fungi actually produce somewhere between 1.4 million and 4.3 million different chemical compounds, meaning we’ve only discovered about 1-2% of what’s out there. By studying the genomes of fungi, researchers estimate that for every fungal medicine we know about, there could be 50-100 more waiting to be discovered, representing an enormous opportunity for developing new drugs and therapies.

Screening microbial inhibitors of Pseudogymnoascus destructans in Northern China

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Scientists in Northern China have found bacteria living on bat skin and in cave soil that can kill the fungus responsible for white-nose syndrome, a disease devastating bat populations worldwide. These bacteria produce various antifungal compounds including volatile organic compounds that diffuse through the air and damage the fungus’s structure. By analyzing the genetic makeup of these bacteria, researchers identified specific genes responsible for producing these antifungal compounds, offering hope for developing biological control treatments that could protect bats and reduce fungal loads in cave environments.

Haplotype-Phased Chromosome-Level Genome Assembly of Floccularia luteovirens Provides Insights into Its Taxonomy, Adaptive Evolution, and Biosynthetic Potential

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Scientists successfully decoded the complete genetic blueprint of the yellow mushroom (Floccularia luteovirens), a valuable medicinal fungus found on the Tibetan Plateau. The high-quality genome assembly revealed the mushroom produces many different beneficial compounds like antitumor and anti-inflammatory molecules. The study also corrected previous scientific confusion about the mushroom’s evolutionary classification, showing it’s more closely related to other fungi than previously thought, and revealed how it adapted to harsh alpine conditions.

Integrated Transcriptomics and Metabolomics Provide Insight into Degeneration-Related Molecular Mechanisms of Morchella importuna During Repeated Subculturing

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Morel mushrooms lose quality when repeatedly cultured in laboratories, becoming slower-growing and less vibrant. Scientists discovered this happens because genes controlling antioxidant production shut down, allowing harmful free radicals to damage cells. By avoiding frequent subculturing and using cold storage or antioxidant supplements, farmers can keep their morel strains healthy and productive for longer.

Comparative genome analysis of patulin-producing Penicillium paneum OM1 isolated from pears

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Scientists sequenced the genome of a pear fungus called Penicillium paneum that produces patulin, a toxic compound found in moldy apples and pears. By analyzing its genetic blueprint, researchers identified 33 different toxin-producing gene clusters, with special focus on the 15 genes responsible for patulin production. The findings reveal which genes P. paneum uses to make patulin and how they compare to other fungal species, potentially helping develop better ways to prevent patulin contamination in fruit and fruit products.

Providing a toolbox for genomic engineering of Trichoderma aggressivum

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Scientists have developed a set of techniques to genetically modify the fungus Trichoderma aggressivum, which is usually known for ruining mushroom crops. This genetic toolkit allows researchers to edit genes in this fungus to study how it produces various compounds and why it affects mushrooms. By using modern gene-editing technology called CRISPR, researchers can now create specific mutations and study the fungus’s useful properties, such as its potential to protect crops or promote plant growth.

Microbe Profile: Streptomyces formicae KY5: an ANT-ibiotic factory

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Scientists have discovered a special bacterium called Streptomyces formicae that lives in ant nests and produces powerful antibiotics. This bacterium makes formicamycins, which can kill dangerous bacteria like methicillin-resistant Staphylococcus aureus that resists many common antibiotics. Using advanced genetic tools, researchers can modify this bacterium to unlock hidden antibiotic-producing pathways, potentially leading to new medicines to fight drug-resistant infections.

Genomic characterization and fermentation study of the endophyte Stemphylium sp. (Aa22), a producer of bioactive alkyl-resorcinols

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Scientists have studied a beneficial fungus called Stemphylium sp. Aa22 that lives inside wormwood plants and produces natural insect-repelling compounds called alkyl-resorcinols. By reading the complete genetic code of this fungus, researchers identified the gene responsible for making these compounds and found that growing the fungus in liquid culture produces more of the desired compounds than growing it on solid rice. This research could lead to developing natural, environmentally-friendly pesticides to protect crops from aphids and other pests.

Insights into metabolic and pharmacological profiling of Aspergillus ficuum through bioinformatics and experimental techniques

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Researchers studied a fungus called Aspergillus ficuum and found it contains compounds with potential medicinal benefits. The fungal extract showed strong antibacterial activity against disease-causing bacteria and reduced inflammation in mice. Additionally, the extract had antioxidant properties that help fight harmful free radicals, with no toxic effects observed, making it a promising candidate for developing new medications.

Comparative genome analysis of patulin-producing Penicillium paneum OM1 isolated from pears

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This research examined the genetic makeup of a mold called Penicillium paneum that contaminates pears and apples by producing a toxic substance called patulin. Scientists sequenced the entire genome and identified all the genes responsible for patulin production. They found that this mold has 33 different gene clusters for producing various toxic compounds, with the patulin-producing genes being highly similar to those in other related molds. This genetic knowledge could help develop better strategies to prevent patulin contamination in fruit crops.

Research Keyword: biosynthetic gene clusters